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Items: 4

1.

Comprehensive performance comparison of high-resolution array platforms for genome-wide Copy Number Variation (CNV) analysis in humans [IlluminaCytoSNP850K]

(Submitter supplied) Background High-resolution microarray technology is routinely used in basic research and clinical practice to efficiently detect copy number variants (CNVs) across the entire human genome. A new generation of arrays combining high probe densities with optimized designs will comprise essential tools for genome analysis in the coming years. We systematically compared the genome-wide CNV detection power of all 17 available array designs from the Affymetrix, Agilent, and Illumina platforms by hybridizing the well-characterized genome of 1000 Genomes Project subject NA12878 to all arrays, and performing data analysis using both manufacturer-recommended and platform-independent software. more...
Organism:
Homo sapiens
Type:
Genome variation profiling by SNP array
Platform:
GPL19718
2 Samples
Download data: IDAT, TXT
Series
Accession:
GSE96723
ID:
200096723

PubMed Full text in PMC Similar studies

2.

IIllumina Infinium human CytoSNP-850K BeadChip

(Submitter supplied) See manufacturer's website
Organism:
Homo sapiens
15 Series
176 Samples
Download data: CSV
Platform
Accession:
GPL19718
ID:
100019718

3.

NA12878 Genomic DNA Replicate 2 (IlluminaCytoSNP850K)

Organism:
Homo sapiens
Source name:
Blood, B Lymphocyte
Platform:
GPL19718
Series:
GSE96723 GSE96909
Download data: IDAT, TXT
Sample
Accession:
GSM2538924
ID:
302538924

4.

NA12878 Genomic DNA Replicate 1 (IlluminaCytoSNP850K)

Organism:
Homo sapiens
Source name:
Blood, B Lymphocyte
Platform:
GPL19718
Series:
GSE96723 GSE96909
Download data: IDAT, TXT
Sample
Accession:
GSM2538923
ID:
302538923

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db=gds|term=GSE96723[Accession]|query=7|qty=2|blobid=MCID_67277920d916f00968684535|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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