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Items: 4

1.

Comprehensive performance comparison of high-resolution array platforms for genome-wide Copy Number Variation (CNV) analysis in humans [IlluminaHumanOmniExpress]

(Submitter supplied) Background High-resolution microarray technology is routinely used in basic research and clinical practice to efficiently detect copy number variants (CNVs) across the entire human genome. A new generation of arrays combining high probe densities with optimized designs will comprise essential tools for genome analysis in the coming years. We systematically compared the genome-wide CNV detection power of all 17 available array designs from the Affymetrix, Agilent, and Illumina platforms by hybridizing the well-characterized genome of 1000 Genomes Project subject NA12878 to all arrays, and performing data analysis using both manufacturer-recommended and platform-independent software. more...
Organism:
Homo sapiens
Type:
Genome variation profiling by SNP array
Platform:
GPL21168
2 Samples
Download data: IDAT, TXT
Series
Accession:
GSE96790
ID:
200096790
2.

HumanOmniExpress-24 v1.0 BeadChip [SNP_ID version]

(Submitter supplied) See manufacturer's website
Organism:
Homo sapiens
14 Series
1 Related Platform
301 Samples
Download data
Platform
Accession:
GPL21168
ID:
100021168
3.

NA12878 Genomic DNA Replicate 2 (IlluminaHumanOmniExpress)

Organism:
Homo sapiens
Source name:
Blood, B Lymphocyte
Platform:
GPL21168
Series:
GSE96790 GSE96909
Download data: IDAT, TXT
Sample
Accession:
GSM2544146
ID:
302544146
4.

NA12878 Genomic DNA Replicate 1 (IlluminaHumanOmniExpress)

Organism:
Homo sapiens
Source name:
Blood, B Lymphocyte
Platform:
GPL21168
Series:
GSE96790 GSE96909
Download data: IDAT, TXT
Sample
Accession:
GSM2544145
ID:
302544145
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Supplemental Content

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