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Items: 14

1.

Large-scale genomic reorganizations of topological domains (TADs) at the HoxD locus (4C-Seq)

(Submitter supplied) The transcriptional activation of Hoxd genes during mammalian limb development involves dynamic interactions with the two Topologically Associating Domains (TADs) flanking the HoxD cluster. In particular, the activation of the most posterior Hoxd genes in developing digits is controlled by regulatory elements located in the centromeric TAD (C-DOM) through long-range contacts. To assess the structure-function relationships underlying such interactions, we measured compaction levels and TAD discreteness using a combination of chromosome conformation capture (4C-seq) and DNA FISH. more...
Organism:
Mus musculus
Type:
Other
Platform:
GPL17021
12 Samples
Download data: BEDGRAPH
Series
Accession:
GSE98861
ID:
200098861

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina HiSeq 2500 (Mus musculus)

Organism:
Mus musculus
11095 Series
299192 Samples
Download data
Platform
Accession:
GPL17021
ID:
100017021

3.

DFL_E12_Inv_Island-IIVP

Organism:
Mus musculus
Source name:
Forelimb
Platform:
GPL17021
Series:
GSE98233 GSE98861
Download data: BEDGRAPH
Sample
Accession:
GSM2616867
ID:
302616867

SRA Run Selector

4.

DFL_E12_WT_Island-IIVP

Organism:
Mus musculus
Source name:
Forelimb
Platform:
GPL17021
Series:
GSE98233 GSE98861
Download data: BEDGRAPH
Sample
Accession:
GSM2616866
ID:
302616866

SRA Run Selector

5.

DFL_E12_Inv_Hoxd13VP

Organism:
Mus musculus
Source name:
Forelimb
Platform:
GPL17021
Series:
GSE98233 GSE98861
Download data: BEDGRAPH
Sample
Accession:
GSM2616865
ID:
302616865

SRA Run Selector

6.

DFL_E12_WT_Hoxd13VP_250bp

Organism:
Mus musculus
Source name:
Forelimb
Platform:
GPL17021
Series:
GSE98233 GSE98861
Download data
Sample
Accession:
GSM2616864
ID:
302616864

SRA Run Selector

7.

DFL_E12_del4_Hoxd13VP

Organism:
Mus musculus
Source name:
Forelimb
Platform:
GPL17021
Series:
GSE98233 GSE98861
Download data: BEDGRAPH
Sample
Accession:
GSM2616863
ID:
302616863

SRA Run Selector

8.

DFL_E12_del3_Hoxd13VP

Organism:
Mus musculus
Source name:
Forelimb
Platform:
GPL17021
Series:
GSE98233 GSE98861
Download data: BEDGRAPH
Sample
Accession:
GSM2616862
ID:
302616862

SRA Run Selector

9.

DFL_E12_del2_Hoxd13VP

Organism:
Mus musculus
Source name:
Forelimb
Platform:
GPL17021
Series:
GSE98233 GSE98861
Download data: BEDGRAPH
Sample
Accession:
GSM2616861
ID:
302616861

SRA Run Selector

10.

DFL_E12_del1_Hoxd13VP

Organism:
Mus musculus
Source name:
Forelimb
Platform:
GPL17021
Series:
GSE98233 GSE98861
Download data: BEDGRAPH
Sample
Accession:
GSM2616860
ID:
302616860

SRA Run Selector

11.

DFL_E12_WT3_Hoxd13VP

Organism:
Mus musculus
Source name:
Forelimb
Platform:
GPL17021
Series:
GSE98233 GSE98861
Download data: BEDGRAPH
Sample
Accession:
GSM2616859
ID:
302616859

SRA Run Selector

12.

DFL_E12_WT2_Hoxd13VP

Organism:
Mus musculus
Source name:
Forelimb
Platform:
GPL17021
Series:
GSE98233 GSE98861
Download data: BEDGRAPH
Sample
Accession:
GSM2616858
ID:
302616858

SRA Run Selector

13.

PFL_E12_WT_Hoxd13VP

Organism:
Mus musculus
Source name:
Forelimb
Platform:
GPL17021
Series:
GSE98233 GSE98861
Download data: BEDGRAPH
Sample
Accession:
GSM2616857
ID:
302616857

SRA Run Selector

14.

DFL_E12_WT_Hoxd13VP

Organism:
Mus musculus
Source name:
Forelimb
Platform:
GPL17021
Series:
GSE98233 GSE98861
Download data: BEDGRAPH
Sample
Accession:
GSM2616856
ID:
302616856

SRA Run Selector

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db=gds|term=GSE98861[Accession]|query=8|qty=2|blobid=MCID_6726d04c8779bd4d7b39b4cc|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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