U.S. flag

An official website of the United States government

Format
Sort by

Send to:

Choose Destination

Search results

Items: 4

1.

Genome-wide identification of PIF-binding sites and direct-target genes of PIF transcriptional regulation in skotomorphogenesis

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Arabidopsis thaliana
Type:
Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing
Platform:
GPL13222
22 Samples
Download data: TXT
Series
Accession:
GSE43286
ID:
200043286
2.

Genome-wide identification of PIF1-binding sites and direct-target genes of PIF1 transcriptional regulation in skotomorphogenesis

(Submitter supplied) Dark-grown seedlings exhibit skotomorphogenic development. Genetic and molecular evidence indicates that a quartet of Arabidopsis Phytochrome (phy)-Interacting bHLH Factors (PIF1, 3, 4 and 5) are critically necessary to maintaining this developmental state, and that light activation of phy induces a switch to photomorphogenic development by inducing rapid degradation of the PIFs. Here, using combined ChIP-seq and RNA-seq analyses, we have identified genes that are direct targets of PIF1 transcriptional regulation, and we provide evidence that the quartet collectively regulate these genes by shared, direct binding to the target promoters in promoting skotomorphogenesis.
Organism:
Arabidopsis thaliana
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL13222
6 Samples
Download data: TXT
Series
Accession:
GSE43283
ID:
200043283
3.

Illumina HiSeq 2000 (Arabidopsis thaliana)

Organism:
Arabidopsis thaliana
776 Series
11039 Samples
Download data
Platform
Accession:
GPL13222
ID:
100013222
4.

PIF1-peaks-3

Organism:
Arabidopsis thaliana
Source name:
whole seedlings
Platform:
GPL13222
Series:
GSE43283 GSE43286
Download data
Sample
Accession:
GSM1059959
ID:
301059959
Format
Sort by

Send to:

Choose Destination

Supplemental Content

db=gds|term=GSM1059959[Accession]|query=1|qty=2|blobid=MCID_669d052f57bd0c11909b75c0|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
   Taxonomic Groups  [List]
Tree placeholder
    Top Organisms  [Tree]

Find related data

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center