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Items: 4

1.

Yeast FAIRE Study_Cell cycle-specified fluctuation of nucleosome occupancy at gene promoters.

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Saccharomyces cerevisiae
Type:
Genome binding/occupancy profiling by genome tiling array
Platforms:
GPL3700 GPL3703
75 Samples
Download data: GPR
Series
Accession:
GSE4736
ID:
200004736

PubMed Full text in PMC Similar studies Analyze with GEO2R

2.

Yeast FAIRE_Cell Cycle Study

(Submitter supplied) The packaging of DNA into nucleosomes influences the accessibility of underlying regulatory information. Nucleosome occupancy and positioning are best characterized in the budding yeast Saccharomyces cerevisiae, albeit in asynchronous cell populations or on individual promoters such as PHO5 and GAL1–10. Using FAIRE (formaldehyde-assisted isolation of regulatory elements) and whole-genome microarrays, we examined changes in nucleosome occupancy throughout the mitotic cell cycle in synchronized populations of S. more...
Organism:
Saccharomyces cerevisiae
Type:
Genome binding/occupancy profiling by genome tiling array
Platform:
GPL3700
35 Samples
Download data: GPR
Series
Accession:
GSE4719
ID:
200004719

PubMed Full text in PMC Similar studies Analyze with GEO2R

3.

Lieb Lab at UNC-CH_Yeast Whole-genome Array (PCR-based)

(Submitter supplied) Whole-genome microarrays with PCR-amplified products represent ORFs, intergenic regions, and other noncoding regions (rDNA, tRNA, transposons, transposon long terminal repeats, telomeres, centromeres, and introns). Generally, each ORF was represented from start codon to stop codon. The intergenic regions consisted of the DNA between annotated ORFs divided such that PCR products were not longer than 1.5 kb, with a few exceptions. more...
Organism:
Saccharomyces cerevisiae
3 Series
71 Samples
Download data: GAL
Platform
Accession:
GPL3700
ID:
100003700

4.

Yeast FAIRE_time 72, cell cycle #1

Organism:
Saccharomyces cerevisiae
Source name:
genomic unfixed DBY8724 (channel 1) time 72 fixed DBY8724 (channel 2)
Platform:
GPL3700
Series:
GSE4719 GSE4736
Download data: GPR
Sample
Accession:
GSM106538
ID:
300106538

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