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Items: 3

1.

Cohesin and CTCF Differentially Affect the Chromatin Architecture and Gene Expression in Human Cells

(Submitter supplied) Recent studies of genome-wide chromatin interactions have revealed that the human genome is partitioned into many self-associating topological domains. The boundary sequences are enriched for binding sites of CTCF and the cohesin complex, implicating these two factors in the establishment or maintenance of topological domains. To determine the role of cohesin and CTCF in higher order chromatin architecture in human cells, we proteolytically cleaved the cohesin complex from interphase chromatin and examined changes in chromosomal organization as well as transcriptome. more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other
Platform:
GPL11154
18 Samples
Download data: BW, RPKM, TXT
2.

Illumina HiSeq 2000 (Homo sapiens)

Platform
Accession:
GPL11154
ID:
100011154
3.

Hi-C, RAD21cv HEK293, HRV treated, replicate one

Organism:
Homo sapiens
Source name:
Hi-C, RAD21cv HEK293, HRV treated
Platform:
GPL11154
Series:
GSE44267
Download data: TXT
Sample
Accession:
GSM1081528
ID:
301081528
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db=gds|term=GSM1081528[Accession]|query=1|qty=2|blobid=MCID_669da17d57bd0c1190a4214a|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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