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Items: 3

1.

Identification of small ORFs in vertebrates using ribosome footprinting and evolutionary conservation

(Submitter supplied) Identification of the coding elements in the genome is a fundamental step to understanding the building blocks of living systems. Short peptides (< 100 aa) have emerged as important regulators of development and physiology, but their identification has been limited by their size. We have leveraged the periodicity of ribosome movement on the mRNA to define actively translated ORFs by ribosome footprinting. more...
Organism:
Danio rerio
Type:
Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing
Platform:
GPL14875
30 Samples
Download data: TXT
Series
Accession:
GSE53693
ID:
200053693

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina HiSeq 2000 (Danio rerio)

Organism:
Danio rerio
295 Series
4648 Samples
Download data
Platform
Accession:
GPL14875
ID:
100014875

3.

2h input mRNA run 1

Organism:
Danio rerio
Source name:
Whole embryos
Platform:
GPL14875
Series:
GSE53693
Download data
Sample
Accession:
GSM1299087
ID:
301299087

SRA Run Selector

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db=gds|term=GSM1299087[Accession]|query=4|qty=2|blobid=MCID_6697dfe0deb7cc086498e052|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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