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Items: 4

1.

SEQC Toxicogenomics Study: RNA-Seq data set

(Submitter supplied) The comparative advantages of RNA-Seq and microarrays in transcriptome profiling were evaluated in the context of a comprehensive study design. Gene expression data from Illumina RNA-Seq and Affymetrix microarrays were obtained from livers of rats exposed to 27 agents that comprised of seven modes of action (MOAs); they were split into training and test sets and verified with real time PCR.
Organism:
Rattus norvegicus
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL17116 GPL14844
116 Samples
Download data: PDF, TXT
Series
Accession:
GSE55347
ID:
200055347
2.

SEQC Project

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Rattus norvegicus; synthetic construct; Homo sapiens
Type:
Expression profiling by array; Expression profiling by high throughput sequencing
15 related Platforms
4521 Samples
Download data: CEL, TXT
Series
Accession:
GSE47792
ID:
200047792
3.

Illumina HiScanSQ (Rattus norvegicus)

Organism:
Rattus norvegicus
8 Series
306 Samples
Download data
Platform
Accession:
GPL17116
ID:
100017116
4.

In Vivo Rat Liver Carcinogen (COH_WANG_AB0142ACXX_97998_L_PHE_NN_OG_ACAGTG_s_2)

Organism:
Rattus norvegicus
Source name:
Liver
Platform:
GPL17116
Series:
GSE47792 GSE55347
Download data
Sample
Accession:
GSM1336185
ID:
301336185
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