GSM1342388[Accession] - GEO DataSets

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Items: 3

Select item 2000557191.

Transcriptome reorganization of gene-rewired Escherichia coli cells in response to histidine depletion

(Submitter supplied) An assortment of genetically engineered Escherichia coli strains of the rewired gene regulation were used to study whether the cells could adapt to the environmental changes without the evolved gene regulatory machinaries. These E. coli strains had a synthetic gene circuit comprising a rewried gene that natively located within the His opeon. The cells growing under histidine supplied or depleted conditions were subjected to the macrioarray analysis. more...

Organism:: Escherichia coli

Type:: Expression profiling by genome tiling array

Platform:: GPL13336
90 Samples

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Accession:: GSE55719

ID:: 200055719

PubMed Full text in PMC Similar studies

Select item 1000133362.

Affymetrix Escherichia coli full sequence array (EcFS) [EcFS_1, EcFS_2, and EcFS_3]

(Submitter supplied) A high-density DNA microarray (Ono et al, 2008; Suzuki et al, 2007) covering the whole genome of E. coli W3110 strain (GenoBase, http://ecoli.naist.jp/GB6/search.jsp) was utilised. Both strands of the genome were alternately tiled at single-base resolution using 21-mer perfectly matching and three mismatching probes. A library consisting of a total of 18.6 million probes was arranged on three GeneChips for microarray analysis, covering four types of probe throughout the 4.6-Mb E. more...