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Items: 4

1.

The transition between transcriptional initiation and elongation in E. coli is highly variable and often rate-limiting

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Escherichia coli
Type:
Expression profiling by genome tiling array; Genome binding/occupancy profiling by genome tiling array
Platform:
GPL4458
12 Samples
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Series
Accession:
GSE6069
ID:
200006069
2.

ChIP-chip of Sigma70 and RNAP Beta in vivo in E. coli MG1655

(Submitter supplied) These data were used to infer the genome-wide localization of sigma70 and core RNAP beta subunit for the study "The transition between transcriptional initiation and elongation in E. coli is highly variable and often rate-limiting" (Reppas et al. 2006). This study analyzes transfrags with respect to the ChIP profile of the sigma70 and the beta subunit of RNA polymerase. Keywords: ChIP-chip; tiled analysis of mRNA expression
Organism:
Escherichia coli
Type:
Genome binding/occupancy profiling by genome tiling array
Platform:
GPL4458
8 Samples
Download data
Series
Accession:
GSE6061
ID:
200006061
3.

Escherichia coli MG1655 382K 50-mer tiling array

(Submitter supplied) Custom NimbleGen maskless oligonucleotide E. coli tiling array that covers the entire genome with 382177 50-mers tiled every ~12 bp on alternate strands. A few regions are covered with 1 bp tiling.
Organism:
Escherichia coli
3 Series
12 Samples
Download data
Platform
Accession:
GPL4458
ID:
100004458
4.

Sigma70_ChIP_A_cy5

Organism:
Escherichia coli
Source name:
E. coli MG1655
Platform:
GPL4458
Series:
GSE6061 GSE6069
Download data
Sample
Accession:
GSM140689
ID:
300140689
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Supplemental Content

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