GEO DataSets

(Submitter supplied) The tissue-specific pattern of mRNA expression can indicate important clues about gene function. High-density oligonucleotide arrays offer the opportunity to examine patterns of gene expression on a genome scale. Toward this end, we have designed custom arrays that interrogate the expression of the vast majority of protein-encoding human and mouse genes and have used them to profile a panel of 79 human and 61 mouse tissues. more...

Organism:

Homo sapiens; Mus musculus

Type:

Expression profiling by array

Datasets:

GDS592 GDS596

Platforms:

GPL96 GPL1073 GPL1074

438 Samples

Download data: CEL

Gene atlas of mouse protein-encoding transcriptome. Gene expression profiles from 61 physiologically normal tissues. Samples generated from adult (10-12 week old) C57BL/6 mice (4 male, 3 female) by dissection.

Organism:

Mus musculus

Type:

Expression profiling by array, count, 61 tissue sets

Platform:

GPL1073

Series:

GSE1133

122 Samples

Download data: CEL

(Submitter supplied) GNF1M We identified a non-redundant set of target sequences for the mouse using the following sources: RefSeq (12,029 sequences), Celera (29,331 sequences), and RIKEN (46,299 sequences). First, all sequences were RepeatMasked to remove repetitive elements. Next, sequence identity between individual sequences was established using pairwise BLAT or BLAST and sim4. The results from single-linkage clustering were further triaged to produce a final target set of 36,182 targets with the highest degree of confidence of computational prediction (biasing toward sequences containing Interpro domains and away from non-coding RNAs). more...

Organism:

Mus musculus

2 DataSets

9 Series

310 Samples

Download data: CDF, CIF, GIN, PROBE, PSI, SIF, TAB