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Items: 4

1.

In vitro, genomic context identification of transcription factor binding sites

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Zea mays; Arabidopsis thaliana
Type:
Other; Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL17628 GPL17639
941 Samples
Download data: NARROWPEAK
Series
Accession:
GSE60143
ID:
200060143

PubMed Full text in PMC Similar studies

2.

A Comprehensive Atlas of Arabidopsis Regulatory DNA [DAP-seq]

(Submitter supplied) We have developed a high throughput, next-generation DNA sequencing assay for rapid transcription factor binding site (TFBS) discovery in a genomic context. DNA affinity purification sequencing (DAP-seq), which uses affinity-purified transcription factors (TFs) to capture genomic DNA fragments, was applied to all 1,725 Arabidopsis thaliana TFs. High confidence TFBS motifs for 529 TFs and genome-wide enrichment maps for 349 factors were identified. more...
Organism:
Zea mays; Arabidopsis thaliana
Type:
Other
Platforms:
GPL17639 GPL17628
936 Samples
Download data: NARROWPEAK
Series
Accession:
GSE60141
ID:
200060141

PubMed Full text in PMC Similar studies SRA Run Selector

3.

Illumina HiSeq 2500 (Arabidopsis thaliana)

Organism:
Arabidopsis thaliana
816 Series
14458 Samples
Download data
Platform
Accession:
GPL17639
ID:
100017639

4.

AP2EREBP_tnt.AT1G01250_col_a

Organism:
Arabidopsis thaliana
Source name:
young leaf
Platform:
GPL17639
Series:
GSE60141 GSE60143
Download data: NARROWPEAK
Sample
Accession:
GSM1925016
ID:
301925016

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db=gds|term=GSM1925016[Accession]|query=34|qty=3|blobid=MCID_6725e2bfd4e4841b7b622089|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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