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Items: 4

1.

Transposable elements (TEs) contribute to stress-related long intergenic noncoding RNAs in Plants

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Arabidopsis thaliana; Zea mays subsp. mays; Oryza sativa Japonica Group
Type:
Expression profiling by array
Platforms:
GPL18523 GPL18525 GPL17639
8 Samples
Download data: GTF
Series
Accession:
GSE92444
ID:
200092444

PubMed Full text in PMC Similar studies

2.

Transposable elements (TEs) contribute to stress-related long intergenic noncoding RNAs in Plants (I)

(Submitter supplied) Long intergenic noncoding RNAs (lincRNAs) are widespread in cellular organisms, however, the origins and functions of many lincRNAs remain to be explored. Transposable elements (TEs) are widely distributed in many eukaryotic genomes, and often account for large fractions of plant and animal genomes. By using strand-specific RNA sequencing, we profiled the expression patterns of lincRNAs in Arabidopsis, rice and maize, and identified TE-associated lincRNAs (TE-lincRNAs). more...
Organism:
Zea mays subsp. mays; Arabidopsis thaliana; Oryza sativa Japonica Group
Type:
Non-coding RNA profiling by high throughput sequencing
Platforms:
GPL17639 GPL18523 GPL18525
4 Samples
Download data: GTF
Series
Accession:
GSE76798
ID:
200076798

PubMed Full text in PMC Similar studies SRA Run Selector

3.

Illumina HiSeq 2500 (Arabidopsis thaliana)

Organism:
Arabidopsis thaliana
814 Series
14392 Samples
Download data
Platform
Accession:
GPL17639
ID:
100017639

4.

ddm1 Mutant Arabidopsis

Organism:
Arabidopsis thaliana
Source name:
total RNAs, seedling
Platform:
GPL17639
Series:
GSE76798 GSE92444
Download data: GTF
Sample
Accession:
GSM2038044
ID:
302038044

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db=gds|term=GSM2038044[Accession]|query=9|qty=4|blobid=MCID_670c81c5475a635e85fea50d|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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