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Items: 3

1.

3D structures of individual mammalian genomes reveal principles of nuclear organization

(Submitter supplied) The folding of genomic DNA from the beads-on-a-string like structure of nucleosomes into higher order assemblies is thought to be critically linked to nuclear processes, but it is unclear to what degree it is a cause or consequence of function. We have calculated the first 3D structural models of entire mammalian genomes using data from a new chromosome conformation capture protocol that allows us to first image and then process single cells. more...
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other
Platforms:
GPL17021 GPL16417
42 Samples
Download data: BED, HDF5, PDB, TSV, TXT, XYZ
Series
Accession:
GSE80280
ID:
200080280
2.

Illumina HiSeq 2500 (Mus musculus)

Platform
Accession:
GPL17021
ID:
100017021
3.

H3K27me3 ChIP (haploid)

Organism:
Mus musculus
Source name:
mESCs
Platform:
GPL17021
Series:
GSE80280
Download data: BED
Sample
Accession:
GSM2123548
ID:
302123548
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db=gds|term=GSM2123548[Accession]|query=2|qty=2|blobid=MCID_67104b7ec7d3ca20d57a49d6|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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