GSM213731[Accession] - GEO DataSets

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Items: 3

Select item 2000086281.

Across array comparative genomic hybridization

(Submitter supplied) Aim of this study is to test if a reference channel of a different array can be used to make array CGH more sensitive, cost effective and less labor intensive. The BT474 breast cancer cell line was compared to a mix of normal reference DNAs hybridized on different arrays and days and DNA copy number profiles were evaluated. Quality was assessed, using regular dual channel array CGH as a standard, using four quality measures; i.e. more...

Organism:: Homo sapiens

Type:: Genome variation profiling by array

Platforms:: GPL5571 GPL5477
24 Samples

Download data: TXT

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Accession:: GSE8628

ID:: 200008628

Analyze with GEO2R

Select item 1000054772.

Agilent-014950 Human Genome CGH Microarray 4x44K (Feature Number version)

(Submitter supplied) Transfer of the Human Genome CGH Microarray 44B to the 4x44K format Arrays of this design have barcodes that begin with 16014950 or 2514950. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. more...