GSM22565[Accession] - GEO DataSets

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Items: 5

Select item 2000033041.

Comparison of gene expression in conventional and germ-free intestine

(Submitter supplied) Whole tissues corresponding to the ileum, colon and rectum were dissected from adult mice and used for RNA preparation. The aim of experiment was to study the impact of gut microbiota on gene expression in different gut regions. Keywords: comparative genomic hybridization

Organism:: Rattus norvegicus; Mus musculus

Type:: Expression profiling by array

Platforms:: GPL85 GPL81
103 Samples

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Series

Accession:: GSE3304

ID:: 200003304

Analyze with GEO2R

Select item 2000013922.

Comparison of conventional and germ-free gastrointestinal tract

(Submitter supplied) Whole tissues corresponding to the corpus, jejunum, descending colon and rectum were dissected from each mouse, washed with ice-cold PBS, placed into 2ml of RNA-later and flash-frozen in liquid nitrogen. The corpus was defined as the part of the stomach different from the antrum (distinguished by a difference in colour). The jejunum was defined as the tissue between the first 4 cm and the last 2 cm of the small intestinal tube. more...

Organism:: Mus musculus

Type:: Expression profiling by array

Dataset:: GDS640
Platform:: GPL81
24 Samples

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Series

Accession:: GSE1392

ID:: 200001392

Select item 6403.

Germ-free gastrointestinal tract

Analysis of germ-free and conventional corpus, jejunum, descending colon and rectum. Findings identify important interaction between commensal microbiota and gastrointestinal tract transcriptome.

Organism:: Mus musculus

Type:: Expression profiling by array, count, 2 other, 4 tissue sets

Platform:: GPL81
Series:: GSE1392
24 Samples

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DataSet

Accession:: GDS640

ID:: 640

Select item 1000000814.

[MG_U74Av2] Affymetrix Murine Genome U74A Version 2 Array

(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 June 07, 2012: annotation table updated with netaffx build 32 June 24, 2016: annotation table updated with netaffx build 35 Protocol: see manufacturer's web site The MG-U74 set includes 3 arrays with a total of 36899 entries and was indexed 29-Jan-2002. more...