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GEO DataSets

Functional Genomics Studies

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Items: 3

Select item 2000909351.

Transcriptome Analyses of Two Hybrid Citrus Cultivars in Seedlings Etiolation

(Submitter supplied) Citrus species are among the most important fruit crops. However, gene regulation and signaling pathways related to etiolation in this crop remain unknown. Using Illumina sequencing technology, modification of global gene expression in two hybrid citrus cultivars—Huangguogan and Shiranuhi, respectively—were investigated. More than 834.16 million clean reads and 125.12 Gb of RNA-seq data were obtained, more than 91.37% reads had a quality score of Q30 (sequencing error rate, 0.1%). more...

Organism:: Citrus reticulata x Citrus sinensis; (Citrus unshiu x Citrus sinensis) x Citrus reticulata

Type:: Expression profiling by high throughput sequencing

Platforms:: GPL22752 GPL22751
18 Samples

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Series

Accession:: GSE90935

ID:: 200090935

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000227512.

Illumina HiSeq 4000 ((Citrus unshiu x Citrus sinensis) x Citrus reticulata)

Organism:: (Citrus unshiu x Citrus sinensis) x Citrus reticulata

1 Series
9 Samples

Platform

Accession:: GPL22751

ID:: 100022751

Select item 3024177653.

Shiranuhi multicoloured seedlings, sample 3

Organism:: (Citrus unshiu x Citrus sinensis) x Citrus reticulata

Source name:: leaves

Platform:: GPL22751
Series:: GSE90935

Sample

Accession:: GSM2417765

ID:: 302417765

SRA Run Selector

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GSM2417765[Accession] (3)
GEO DataSets
qw28a05.x1 NCI_CGAP_Ut4 Homo sapiens cDNA clone IMAGE:1992368 3', mRNA sequence
qw28a05.x1 NCI_CGAP_Ut4 Homo sapiens cDNA clone IMAGE:1992368 3', mRNA sequence
gi|3932575|gnl|dbEST|2063570|gb|AI2 .1|

Nucleotide
Taxonomy Links for Nucleotide (Select 1988229876) (1)
Taxonomy
Homo sapiens family with sequence similarity 24, member B, mRNA (cDNA clone MGC:...
Homo sapiens family with sequence similarity 24, member B, mRNA (cDNA clone MGC:45962 IMAGE:5456151), complete cds
gi|21411178|gb|BC031343.1|

Nucleotide
MIF4G domain-containing protein isoform X1 [Homo sapiens]
MIF4G domain-containing protein isoform X1 [Homo sapiens]
gi|2462556523|ref|XP_054172700.1|

Protein

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