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Items: 3

1.

Cell-type-specific Brain Methylomes Profiled via Ultralow-input Microfluidics

(Submitter supplied) Methylomic studies require substantial amounts of DNA samples and this restriction hinders applications involving scarce animal or patient samples with direct biomedical relevance. Here we report a microfluidics-based reduced representative bisulfite sequencing protocol, MIcrofluidic Diffusion-based RRBS (MID-RRBS), that permits methylomic profiling with sub-1 ng starting DNA. Using this technology, we studied DNA methylation in NeuN+ and NeuN- fractions isolated from mouse cerebellum, revealing cell-type specific methylomic patterns. more...
Organism:
Homo sapiens; Mus musculus
Type:
Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing
Platforms:
GPL21103 GPL20301
94 Samples
Download data: BEDGRAPH, TXT
Series
Accession:
GSE88716
ID:
200088716
2.

Illumina HiSeq 4000 (Homo sapiens)

Platform
Accession:
GPL20301
ID:
100020301
3.

GM_0.3ng_RRBS_rep1

Organism:
Homo sapiens
Source name:
GM12878 cell line
Platform:
GPL20301
Series:
GSE88716
Download data: BEDGRAPH
Sample
Accession:
GSM2526931
ID:
302526931
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db=gds|term=GSM2526931[Accession]|query=1|qty=3|blobid=MCID_66508b36d01e38019cb55af5|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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