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Items: 3

1.

Cell-type-specific Brain Methylomes Profiled via Ultralow-input Microfluidics

(Submitter supplied) Methylomic studies require substantial amounts of DNA samples and this restriction hinders applications involving scarce animal or patient samples with direct biomedical relevance. Here we report a microfluidics-based reduced representative bisulfite sequencing protocol, MIcrofluidic Diffusion-based RRBS (MID-RRBS), that permits methylomic profiling with sub-1 ng starting DNA. Using this technology, we studied DNA methylation in NeuN+ and NeuN- fractions isolated from mouse cerebellum, revealing cell-type specific methylomic patterns. more...
Organism:
Mus musculus; Homo sapiens
Type:
Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing
Platforms:
GPL20301 GPL21103
94 Samples
Download data: BEDGRAPH, TXT
Series
Accession:
GSE88716
ID:
200088716
2.

Illumina HiSeq 4000 (Mus musculus)

Platform
Accession:
GPL21103
ID:
100021103
3.

NeuN+_0.5ng_RRBS_rep2

Organism:
Mus musculus
Source name:
Neuron from cerebellum
Platform:
GPL21103
Series:
GSE88716
Download data: BEDGRAPH
Sample
Accession:
GSM2526940
ID:
302526940
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db=gds|term=GSM2526940[Accession]|query=132|qty=3|blobid=MCID_664b4ca88e57fe257737c906|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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