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Items: 3

1.

Diversity of cytosine methylation across the fungi tree of life

(Submitter supplied) Cytosine methylation is a conserved base modification, but explanations for its interspecific variation remain elusive. Only through taxonomic sampling of disparate groups can unifying explanations for interspecific variation be thoroughly tested. Here we leverage phylogenetic resolution of cytosine DNA methyltransferases (DNA MTases) and genome evolution to better understand widespread interspecific variation across 40 diverse fungal species. more...
Organism:
Phycomyces blakesleeanus; Fusarium fujikuroi; Neurospora crassa; Pleurotus ostreatus; Aureobasidium pullulans; Laccaria bicolor; Uncinocarpus reesii; Parasitella parasitica; Botrytis cinerea; Tilletiopsis washingtonensis; Saccharomyces cerevisiae; Aspergillus flavus; Coprinopsis cinerea; Clavispora lusitaniae; Lobosporangium transversale; Radiomyces spectabilis; Flammula alnicola; Cryptococcus neoformans var. grubii; Candidozyma auris; Pyricularia oryzae KJ201; Syncephalis fuscata; Podospora anserina; Phanerodontia chrysosporium; Agaricus bisporus; Mixia osmundae; Sporobolomyces roseus; Cordyceps militaris; Wolfiporia cocos; Spinellus fusiger; Hesseltinella vesiculosa; Microbotryum lychnidis-dioicae; Heterobasidion irregulare; Plenodomus lingam; Candida albicans; Coemansia reversa; Postia placenta; Coemansia spiralis; Kirkomyces cordensis; Metarhizium robertsii; Pseudogymnoascus destructans
Type:
Methylation profiling by high throughput sequencing; Third-party reanalysis
29 related Platforms
31 Samples
Download data: TSV, TXT, XLS
Series
Accession:
GSE112636
ID:
200112636

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina NextSeq 500 (Hesseltinella vesiculosa)

Organism:
Hesseltinella vesiculosa
1 Series
2 Samples
Download data
Platform
Accession:
GPL24817
ID:
100024817

3.

Hesseltinella vesiculosa WGBS run1

Organism:
Hesseltinella vesiculosa
Source name:
Whole organism
Platform:
GPL24817
Series:
GSE112636
Download data: TSV
Sample
Accession:
GSM3074699
ID:
303074699

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db=gds|term=GSM3074699[Accession]|query=7|qty=41|blobid=MCID_672f7884e6e18526434d3a14|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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