GSM3349842[Accession] - GEO DataSets

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Select item 2001188901.

Cold acclimation of the thermoacidophilic red alga Galdieria sulphuraria - changes in gene expression and involvement of horizontally acquired genes

(Submitter supplied) Purpose: We aimed at i) obtaining insight into how a thermophile organism reacts to cold stress, and ii) evaluating the impact of HGT candidates on the acclimation process to temperature decrease. Methods: The experimental design followed a temperature shift timeline: after two weeks of cultivation at 42°C, constant illumination (90 μE) and constant shaking (160 rpm) in photoautotrophic conditions the first sampling took place (Hot_T48_1) and the cultures of G.sulphuraria were swiftly moved to 28°C ( = cold temperature). more...

Organism:: Galdieria sulphuraria

Type:: Expression profiling by high throughput sequencing

Platform:: GPL22605
25 Samples

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Series

Accession:: GSE118890

ID:: 200118890

PubMed Similar studies SRA Run Selector

Select item 1000226052.

Illumina HiSeq 2000 (Galdieria sulphuraria)

Organism:: Galdieria sulphuraria

2 Series
34 Samples

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Platform

Accession:: GPL22605

ID:: 100022605

Select item 3033498423.

Hot_T48_7_Rep C

Organism:: Galdieria sulphuraria

Source name:: Batch Culture - Biological Replicate C - Autorophic - 2xAllen Medium

Platform:: GPL22605
Series:: GSE118890

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Sample

Accession:: GSM3349842

ID:: 303349842

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GSM3349842[Accession] (3)
GEO DataSets
PREDICTED: Homo sapiens insulin like growth factor 2 mRNA binding protein 1 (IGF...
PREDICTED: Homo sapiens insulin like growth factor 2 mRNA binding protein 1 (IGF2BP1), transcript variant X1, mRNA
gi|2462552424|ref|XM_054314727.1|

Nucleotide
hypothetical protein DLAC_00677 [Tieghemostelium lacteum]
hypothetical protein DLAC_00677 [Tieghemostelium lacteum]
gi|1013949513|gb|KYR03173.1||gnl|WG T|DLAC_00677

Protein
RecName: Full=Probable ubiquitin-conjugating enzyme E2 N; AltName: Full=E2 ubiqu...
RecName: Full=Probable ubiquitin-conjugating enzyme E2 N; AltName: Full=E2 ubiquitin-conjugating enzyme N; AltName: Full=Ubiquitin carrier protein N; AltName: Full=Ubiquitin-protein ligase N
gi|284018142|sp|Q86K32.2|UBE2N_DICD

Protein
RecName: Full=Ubiquitin-ribosomal protein eS31 fusion protein; Contains: RecName...
RecName: Full=Ubiquitin-ribosomal protein eS31 fusion protein; Contains: RecName: Full=Ubiquitin; Contains: RecName: Full=Small ribosomal subunit protein eS31; AltName: Full=40S ribosomal protein S27a; Flags: Precursor
gi|302393743|sp|P14797.2|RS27A_DICD

Protein

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