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Items: 4

1.

The mole genome reveals regulatory rearrangements associated with adaptive intersexuality

(Submitter supplied) Linking genomic variation to phenotypical traits remains a major challenge in evolutionary genetics. In this study, we use phylogenomic strategies to investigate a distinctive trait among mammals: the development of masculinizing ovotestes in female moles. By combining a chromosome-scale genome assembly of the Iberian mole, Talpa occidentalis, with transcriptomic, epigenetic, and chromatin interaction datasets, we identify rearrangements altering the regulatory landscape of genes with distinct gonadal expression patterns. more...
Organism:
Mus musculus; Talpa occidentalis
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other
Platforms:
GPL25619 GPL25620 GPL17021
70 Samples
Download data: BEDGRAPH, BW, HIC
Series
Accession:
GSE120589
ID:
200120589

PubMed Full text in PMC Similar studies

2.

The mole genome reveals regulatory rearrangements associated with adaptive intersexuality (RNA-Seq)

(Submitter supplied) Linking genomic variation to phenotypical traits remains a major challenge in evolutionary genetics. In this study, we use phylogenomic strategies to investigate a distinctive trait among mammals: the development of masculinizing ovotestes in female moles. By combining a chromosome-scale genome assembly of the Iberian mole, Talpa occidentalis, with transcriptomic, epigenetic, and chromatin interaction datasets, we identify rearrangements altering the regulatory landscape of genes with distinct gonadal expression patterns. more...
Organism:
Talpa occidentalis; Mus musculus
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL25619 GPL17021
35 Samples
Download data: BW, FA, GFF
Series
Accession:
GSE120582
ID:
200120582

PubMed Full text in PMC Similar studies SRA Run Selector

3.

Illumina HiSeq 2500 (Talpa occidentalis)

Organism:
Talpa occidentalis
9 Series
71 Samples
Download data
Platform
Accession:
GPL25619
ID:
100025619

4.

RNA-TestisPart_P7_To-R3

Organism:
Talpa occidentalis
Source name:
Testicular part of the ovotestis
Platform:
GPL25619
Series:
GSE120582 GSE120589
Download data: BW
Sample
Accession:
GSM3403693
ID:
303403693

SRA Run Selector

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db=gds|term=GSM3403693[Accession]|query=16|qty=3|blobid=MCID_67095ecdc7d3ca20d557e5ce|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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