GSM3467103[Accession] - GEO DataSets

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Items: 3

Select item 2001224781.

Genome-Wide Detection of CNVs and Their Association with Complex Traits in Holsteins

(Submitter supplied) Copy number variation (CNV) is an important type of genetic variation contributing to phenotypic differences among mammals. Up to now, GWAS analysis using CNV called by array CGH is lacking in livestock like Holstein cattle. The objectives of this work are to identify CNVs using high-density aCGH data and explore functional CNVs which are associated with complex traits by GWAS method in Holstein cattle. more...

Organism:: Bos taurus

Type:: Genome variation profiling by genome tiling array; Third-party reanalysis

Platform:: GPL11314
41 Samples

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Accession:: GSE122478

ID:: 200122478

PubMed Full text in PMC Similar studies

Select item 1000113142.

NimbleGen Bos taurus UMD3.0 2.1M WG HD CGH

(Submitter supplied) This array was designed based on Btau_UMD3.0. The Btau_UMD3.1 assembly is identical in almost all respects to UMD3.0. All chromosomes are unchanged. For additional information, see http://www.cbcb.umd.edu/research/bos_taurus_assembly.shtml . The supplementary file 'GPL11314_Btau_4.0.txt' contains the results of LIFTOVER (default setting) to convert the positions of probes from UMD3.0 to Btau_4.0. About 95% (~2,066,000) of the probes were converted successfully. more...