GSM3518735[Accession] - GEO DataSets - NCBI

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Items: 3

Select item 2001240161.

Convergent evolution of a vertebrate-like methylome in a marine sponge

(Submitter supplied) Vertebrates have highly methylated genomes at CpG positions while most invertebrates have sparsely methylated genomes. Therefore, hypermethylation is considered a major innovation that shaped the genome and the regulatory roles of DNA methylation in vertebrates. However, here we report that the marine sponge Amphimedon queenslandica, belonging to one of the earliest branching animal lineages, has evolved a hypermethylated genome with remarkable similarities to that of a vertebrate. more...

Organism:: Mnemiopsis leidyi; Nematostella vectensis; Amphimedon queenslandica; Sycon ciliatum

Type:: Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing

5 related Platforms
36 Samples

Download data: CGMAP, TXT

Series

Accession:: GSE124016

ID:: 200124016

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000259512.

Illumina HiSeq 1500 (Mnemiopsis leidyi)

Organism:: Mnemiopsis leidyi

1 Series
6 Samples

Platform

Accession:: GPL25951

ID:: 100025951

Select item 3035187353.

mC_Mleidyi_30hpf

Organism:: Mnemiopsis leidyi

Source name:: embryos 30 hours post fertilization

Platform:: GPL25951
Series:: GSE124016

Download data: CGMAP

Sample

Accession:: GSM3518735

ID:: 303518735

SRA Run Selector

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GSM3518735[Accession] (3)
GEO DataSets
Homo sapiens potassium channel tetramerization domain containing 17 (KCTD17), tr...
Homo sapiens potassium channel tetramerization domain containing 17 (KCTD17), transcript variant 3, mRNA
gi|2019367932|ref|NM_001282685.2|

Nucleotide
Uncultivated Bacteroidales bacterium UBA4814 genome recovered from SRX559915
Uncultivated Bacteroidales bacterium UBA4814 genome recovered from SRX559915

biosample
Primary familial hypertrophic cardiomyopathy
Primary familial hypertrophic cardiomyopathy

MedGen
Dilated cardiomyopathy 1DD
Dilated cardiomyopathy 1DD

MedGen

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