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Items: 3

1.

Convergent evolution of a vertebrate-like methylome in a marine sponge

(Submitter supplied) Vertebrates have highly methylated genomes at CpG positions while most invertebrates have sparsely methylated genomes. Therefore, hypermethylation is considered a major innovation that shaped the genome and the regulatory roles of DNA methylation in vertebrates. However, here we report that the marine sponge Amphimedon queenslandica, belonging to one of the earliest branching animal lineages, has evolved a hypermethylated genome with remarkable similarities to that of a vertebrate. more...
Organism:
Amphimedon queenslandica; Mnemiopsis leidyi; Nematostella vectensis; Sycon ciliatum
Type:
Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing
5 related Platforms
36 Samples
Download data: CGMAP, TXT
Series
Accession:
GSE124016
ID:
200124016
2.

Illumina NextSeq 500 (Amphimedon queenslandica)

Organism:
Amphimedon queenslandica
4 Series
32 Samples
Download data
Platform
Accession:
GPL22487
ID:
100022487
3.

plX_HALO_EGR_DBD_DAPseq

Organism:
Amphimedon queenslandica
Source name:
swimming_larva_0h
Platform:
GPL22487
Series:
GSE124016
Download data: TXT
Sample
Accession:
GSM3518747
ID:
303518747
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db=gds|term=GSM3518747[Accession]|query=2|qty=5|blobid=MCID_6727badf0f0f4a1358309f75|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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