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Items: 3

1.

High-resolution analysis of chromatin structure by Mnase-SSP

(Submitter supplied) Proof-of-concept for Mnase-SSP: a variant of Mnase-seq. Mnase-SSP dramatically increases the representation of short fragments of nucleolytically-digested DNA, enabling simultaneous analysis of transcription factor binding and nucleosome occupancy using the same assay. We used MNase-SSP to demarcate chromatin architecture at murine promoters and at transcription factor binding sites in murine embryonic stem cells. more...
Organism:
Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL16417 GPL19057
14 Samples
Download data: BAI, BAM
Series
Accession:
GSE125053
ID:
200125053

SRA Run Selector

2.

Illumina NextSeq 500 (Mus musculus)

Organism:
Mus musculus
10275 Series
295680 Samples
Download data
Platform
Accession:
GPL19057
ID:
100019057

3.

Male mESC SSP rep 2

Organism:
Mus musculus
Source name:
Male F123 mESCs from Cast/129 backgrond
Platform:
GPL19057
Series:
GSE125053
Download data: BAI, BAM
Sample
Accession:
GSM3561970
ID:
303561970

SRA Run Selector

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db=gds|term=GSM3561970[Accession]|query=45|qty=2|blobid=MCID_672fee7aaf5f2e3c11689ece|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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