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Items: 4

1.

X chromosome domain architecture regulates Caenorhabditis elegans lifespan but not dosage compensation

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Caenorhabditis elegans
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other
Platform:
GPL22765
26 Samples
Download data: BW, MATRIX, TXT
Series
Accession:
GSE128568
ID:
200128568
2.

X chromosome domain architecture regulates Caenorhabditis elegans lifespan but not dosage compensation [ChIP-seq]

(Submitter supplied) Mechanisms establishing higher-order chromosome structures and their roles in gene regulation are elusive. We analyzed chromosome architecture during nematode X-chromosome dosage compensation, which represses transcription via a dosage-compensation condensin complex (DCC) that binds hermaphrodite Xs and establishes megabase-size topologically associating domains (TADs). We show that DCC binding at high-occupancy sites (rex sites) defines eight TAD boundary locations. more...
Organism:
Caenorhabditis elegans
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL22765
11 Samples
Download data: BW
Series
Accession:
GSE128564
ID:
200128564
3.

Illumina HiSeq 4000 (Caenorhabditis elegans)

Organism:
Caenorhabditis elegans
333 Series
1959 Samples
Download data
Platform
Accession:
GPL22765
ID:
100022765
4.

8rexDeletionPlusrex-32rex-8_IgG_ChIP-seq

Organism:
Caenorhabditis elegans
Source name:
mixed-stage embryos
Platform:
GPL22765
Series:
GSE128564 GSE128568
Download data: BW
Sample
Accession:
GSM3680204
ID:
303680204
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