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Items: 3

1.

Structural variation targets neurodevelopmental genes and identifies SHANK2 as a tumor suppressor in neuroblastoma

(Submitter supplied) Neuroblastoma, like many childhood cancers, exhibits a relative paucity of somatic single nucleotide variants (SNVs). Here, we assess the contribution of structural variation (SV) in neuroblastoma using a combination of whole genome sequencing (WGS; n=135) and single nucleotide polymorphism (SNP) genotyping (n=914) of matched tumor-normal pairs. Our study design provided means for orthogonal validation of SVs as well as validation across genomic platforms. more...
Organism:
Homo sapiens
Type:
SNP genotyping by SNP array; Genome variation profiling by SNP array
5 related Platforms
1747 Samples
Download data: IDAT, TXT
Series
Accession:
GSE131189
ID:
200131189

2.

Illumina HumanHap550 Genotyping BeadChip v1

(Submitter supplied) Version 1, Illumina Sentrix HumaHap550 Genotyping BeadChip Protocol: See manufacturer's website (http://illumina.com)
Organism:
Homo sapiens
6 Series
1 Related Platform
1539 Samples
Download data
Platform
Accession:
GPL6433
ID:
100006433

3.

PAMCXF blood 1

Organism:
Homo sapiens
Source name:
neuroblastoma
Platform:
GPL6433
Series:
GSE131189
Download data: IDAT, TXT
Sample
Accession:
GSM3766280
ID:
303766280

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db=gds|term=GSM3766280[Accession]|query=3|qty=2|blobid=MCID_67143248c7d3ca20d569e917|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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