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GEO DataSets

Functional Genomics Studies

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Items: 3

Select item 2001339261.

RRBS profiling and Transcriptome profiling of Stat3 wild-type, Stat3 knock-out, Dnmt3a/b wild-type and Dnmt3a/b knock-out mouse embryonic stem cells (mES cells)

(Submitter supplied) Naive pluripotent epiblast cells of the preimplantation murine embryo and their in vitro counterpart, embryonic stem (ES) cells, have the capacity to give rise to all cells of the adult. Such developmental plasticity is associated with global genome hypomethylation. It is unclear whether genome methylation is dynamically regulated only via differential expression of DNA methyltransferases (DNMTs) and Ten-eleven Translocation (TET) enzymes, which oxidase methylated DNA. more...

Organism:: Mus musculus

Type:: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing

Platforms:: GPL21103 GPL19057
36 Samples

Download data: TXT

Series

Accession:: GSE133926

ID:: 200133926

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000190572.

Illumina NextSeq 500 (Mus musculus)

Organism:: Mus musculus

10180 Series
294101 Samples

Platform

Accession:: GPL19057

ID:: 100019057

Select item 3040260343.

S3+/+ 2iLIF R2 RRBS

Organism:: Mus musculus

Source name:: mouse embryo

Platform:: GPL19057
Series:: GSE133926

Download data: TXT

Sample

Accession:: GSM4026034

ID:: 304026034

SRA Run Selector

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GSM4026034[Accession] (3)
GEO DataSets
txid45807[Organism] (511)
SRA
RecName: Full=von Willebrand factor A domain-containing protein 1; Flags: Precur...
RecName: Full=von Willebrand factor A domain-containing protein 1; Flags: Precursor
gi|74749155|sp|Q6PCB0.1|VWA1_HUMAN

Protein
Homo sapiens zinc finger protein 43 (ZNF43), transcript variant 5, mRNA
Homo sapiens zinc finger protein 43 (ZNF43), transcript variant 5, mRNA
gi|1890284612|ref|NM_001256653.2|

Nucleotide
Homo sapiens zinc finger protein 85 (ZNF85), transcript variant 1, mRNA
Homo sapiens zinc finger protein 85 (ZNF85), transcript variant 1, mRNA
gi|300388185|ref|NM_003429.4|

Nucleotide

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