U.S. flag

An official website of the United States government

Format
Sort by

Send to:

Choose Destination

Search results

Items: 4

1.

Three-dimensional genome architectural CCCTC-binding factor makes choice in duplicated enhancers at Pcdhα locus

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other
Platform:
GPL20795
74 Samples
Download data: BED, BEDGRAPH, CSV
Series
Accession:
GSE147286
ID:
200147286

PubMed Similar studies

2.

Three-dimensional genome architectural CCCTC-binding factor makes choice in duplicated enhancers at Pcdhα locus. [4C-seq]

(Submitter supplied) By CRISPR/Cas9 DNA-fragment editing, in conjunction with chromosome conformation capture, ChIP-seq and RNA-seq technology, we studied CRISPR single cell clones of duplicated CBS-containing enhancers or promoters in the Pcdhα gene cluster. We found that CTCF plays an essential role in determining promoter choice and enhancer selection. In addition, the choices mediated by CTCF is based on the chromatin loops formed between forward-reverse convergent CBS pairs with the proximal one dominant.
Organism:
Homo sapiens
Type:
Other
Platform:
GPL20795
46 Samples
Download data: BEDGRAPH
Series
Accession:
GSE147274
ID:
200147274

PubMed Similar studies SRA Run Selector

3.

HiSeq X Ten (Homo sapiens)

Organism:
Homo sapiens
2075 Series
35706 Samples
Download data
Platform
Accession:
GPL20795
ID:
100020795

4.

4C_HS51_mE2_CBSmut_rep2

Organism:
Homo sapiens
Source name:
HEC-1-B
Platform:
GPL20795
Series:
GSE147274 GSE147286
Download data: BEDGRAPH
Sample
Accession:
GSM4423268
ID:
304423268

SRA Run Selector

Format
Sort by

Send to:

Choose Destination

Supplemental Content

Filters: Manage Filters

db=gds|term=GSM4423268[Accession]|query=17|qty=2|blobid=MCID_6729249b91da88433d1addce|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
   Taxonomic Groups  [List]
Tree placeholder
    Top Organisms  [Tree]

Find related data

Search details

See more...

Important Links

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > Genes & Expression > Gene Expression Omnibus (GEO) Datasets
Support Center