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Items: 4

1.

Epigenetic reprogramming rewires transcription during the alternation of generations in Arabidopsis

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Arabidopsis thaliana
Type:
Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing; Third-party reanalysis; Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL17639
19 Samples
Download data: TSV
Series
Accession:
GSE155369
ID:
200155369

PubMed Full text in PMC Similar studies

2.

Epigenetic reprogramming events rewire transcription during the alternation of generations in Arabidopsis [RNA-Seq]

(Submitter supplied) Alternation between morphologically distinct haploid and diploid life forms is a defining feature of most plant and algal life cycles, yet the underlying molecular mechanisms that govern these transitions remain unclear. Here, we explore the dynamic relationship between chromatin accessibility and epigenetic modifications during life form transitions in Arabidopsis. The diploid-to-haploid life form transition is governed by the loss of H3K9me2 and DNA demethylation of transposon-associated cis-regulatory elements, which is associated with dramatic changes in chromatin accessibility and transcriptional reprogramming. more...
Organism:
Arabidopsis thaliana
Type:
Expression profiling by high throughput sequencing
Platform:
GPL17639
12 Samples
Download data: TSV, TXT
Series
Accession:
GSE155365
ID:
200155365

PubMed Full text in PMC Similar studies SRA Run Selector

3.

Illumina HiSeq 2500 (Arabidopsis thaliana)

Organism:
Arabidopsis thaliana
819 Series
14471 Samples
Download data
Platform
Accession:
GPL17639
ID:
100017639

4.

dme2_rep3 [RNA-seq]

Organism:
Arabidopsis thaliana
Source name:
Mature pollen
Platform:
GPL17639
Series:
GSE155365 GSE155369
Download data: TSV
Sample
Accession:
GSM4700187
ID:
304700187

SRA Run Selector

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db=gds|term=GSM4700187[Accession]|query=23|qty=2|blobid=MCID_6733dedf5c1af073747bfa45|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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