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Items: 3

1.

RNA-seq of human gut Bacteroides xylanisolvens and Bacteroides ovatus isolates grown on mucin O-linked glycans compared to glucose

(Submitter supplied) Purpose: Examining the transcriptome of human gut bacteria (Bacteroides xylanisolvens/Bacteroides ovatus) that grow on mucin O-linked glycans as a sole carbon source Methods: Strains were grown on 10 mg/ml mucin O-linked glycans (MOG) or 5 mg/ml glucose as a sole carbon source in vitro. Fold change was calculated as MOG over glucose. Once cells reached an optical density corresponding to mid-log phase growth, RNA was isolated and rRNA depleted. more...
Organism:
Bacteroides ovatus; Bacteroides xylanisolvens
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL28983 GPL21072
24 Samples
Download data: XLSX
Series
Accession:
GSE155869
ID:
200155869
2.

Illumina HiSeq 2000 (Bacteroides ovatus)

Organism:
Bacteroides ovatus
1 Series
18 Samples
Download data
Platform
Accession:
GPL28983
ID:
100028983
3.

Bacteroides ovatus D2 glucose 2

Organism:
Bacteroides ovatus
Source name:
Bacterial Total RNA
Platform:
GPL28983
Series:
GSE155869
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Sample
Accession:
GSM4714880
ID:
304714880
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Supplemental Content

db=gds|term=GSM4714880[Accession]|query=19|qty=3|blobid=MCID_672bd302c619b038bd27503b|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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