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Items: 4

1.

Targeted single-cell RNA sequencing of transcription factors facilitates biological insights from human cell experimental models

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL20301
1756 Samples
Download data
Series
Accession:
GSE168634
ID:
200168634

PubMed Full text in PMC Similar studies

2.

Targeted single cell RNA-sequencing of transcription factors facilitates biological insights from human cell experimental models [intestinal stromal cells pre-capture]

(Submitter supplied) Single cell RNA sequencing (scRNA-seq) is a widely used method for identifying cell types and trajectories in biologically heterogeneous samples, but is limited in its detection and quantification of lowly expressed genes. This results in missing important biological signals, such as the expression of key transcription factors (TFs) driving cellular differentiation. We show that targeted sequencing of ~1000 TFs (scCapture-seq) in iPSC-derived neuronal cultures greatly improves the biological information garnered from scRNA-seq. more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL20301
252 Samples
Download data: CSV
Series
Accession:
GSE168626
ID:
200168626

PubMed Full text in PMC Similar studies SRA Run Selector

3.

Illumina HiSeq 4000 (Homo sapiens)

Organism:
Homo sapiens
8488 Series
194953 Samples
Download data
Platform
Accession:
GPL20301
ID:
100020301

4.

intestinal stromal cells pre-capture [WTCHG_288196_227202]

Organism:
Homo sapiens
Source name:
colonic mucosa
Platform:
GPL20301
Series:
GSE168626 GSE168634
Download data
Sample
Accession:
GSM5151516
ID:
305151516

SRA Run Selector

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db=gds|term=GSM5151516[Accession]|query=9|qty=2|blobid=MCID_672e8c451985540249382be3|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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