GSM5350862[Accession] - GEO DataSets - NCBI

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Items: 4

Select item 2001758931.

SMARCA4-deficient rhabdoid tumours show intermediate molecular features between SMARCB1-deficient rhabdoid tumours and small cell carcinomas of the ovary, hypercalcaemic type.

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing; Methylation profiling by genome tiling array; Third-party reanalysis

Platforms:: GPL21145 GPL16791
53 Samples

Download data: IDAT

Series

Accession:: GSE175893

ID:: 200175893

PubMed Similar studies

Select item 2001758922.

Genome-wide DNA methylation profiling of SCCOHT and SMARCB1-mutated rhabdoid tumours

(Submitter supplied) Extracranial rhabdoid tumours (ECRT) are an aggressive malignancy of infancy and early childhood. The vast majority of cases demonstrate inactivation of SMARCB1 (ECRT_SMARCB1) but, rarely, ECRT can harbour the alternative inactivation of SMARCA4 (ECRT_SMARCA4) instead of SMARCB1. To explore the place of ECRTSMARCA4 in the "rhabdoid tumour" spectrum, we generated and collected from previous studies genome-wide DNA methylation array data (n = 85) from Atypical/Teratoid Rhabdoid Tumours (ATRT), ECRT_SMARCB1, ECRT_SMARCA4 and small cell carcinomas of the ovary, hypercalcaemic type (SCCOHT) tumours. more...

Organism:: Homo sapiens

Type:: Methylation profiling by genome tiling array; Third-party reanalysis

Platform:: GPL21145
40 Samples

Download data: IDAT, TXT, XLSX

Series

Accession:: GSE175892

ID:: 200175892

PubMed Similar studies

Select item 1000211453.

Infinium MethylationEPIC

(Submitter supplied) See manufacturer's website

Organism:: Homo sapiens

1168 Series
1 Related Platform
79858 Samples

Download data: CSV

Platform

Accession:: GPL21145

ID:: 100021145

Select item 3053508624.

Organism:: Homo sapiens

Source name:: Fresh frozen sample

Platform:: GPL21145
Series:: GSE175892 GSE175893

Download data: IDAT

Sample

Accession:: GSM5350862

ID:: 305350862

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GSM5350862[Accession] (4)
GEO DataSets
Paenibacillaceae bacterium IGS96 16S ribosomal RNA gene, partial sequence
Paenibacillaceae bacterium IGS96 16S ribosomal RNA gene, partial sequence
gi|364521073|gb|JN680263.1|

Nucleotide
Sphingomonas sp. IGS78 16S ribosomal RNA gene, partial sequence
Sphingomonas sp. IGS78 16S ribosomal RNA gene, partial sequence
gi|364521056|gb|JN680246.1|

Nucleotide
NADH dehydrogenase subunit 2, partial (mitochondrion) [Iole charlottae charlotta...
NADH dehydrogenase subunit 2, partial (mitochondrion) [Iole charlottae charlottae]
gi|1491570208|gb|AYJ76891.1|

Protein
L-asparaginase 2 (putative lipoprotein) [Bacillus subtilis subsp. subtilis str. ...
L-asparaginase 2 (putative lipoprotein) [Bacillus subtilis subsp. subtilis str. 168]
gi|16077338|ref|NP_388151.1|

Protein

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