GSM548932[Accession] - GEO DataSets - NCBI

Warning: The NCBI web site requires JavaScript to function. more...

Format

Summary
Summary (text)
Unique Identifier List

Sort by

Default order
Number of Samples (High to Low)
Number of Samples (Low to High)

Send to:

Choose Destination

File
Clipboard
Collections

Search results

Items: 3

Select item 2000220791.

De novo assembly of siRNA immunity in wild plants

(Submitter supplied) We describe an application of deep sequencing and de novo assembly of short RNA reads to investigate small interfering (si)RNAs mediated immunity in leaf samples from eight tree taxa naturally occurring in Wytham Woods, Oxfordshire, UK. BLAST search for homologues of contigs in the GenBank identified siRNA populations against a number of RNA viruses and a Ty1-copia retrotransposons in these tree species.

Organism:: Betula pendula; Acer pseudoplatanus; Ulmus glabra; Aesculus hippocastanum; Tilia platyphyllos; Corylus avellana; Quercus robur; Fagus sylvatica; Fraxinus excelsior

Type:: Non-coding RNA profiling by high throughput sequencing

Platforms:: GPL10476 GPL10477
4 Samples

Download data: TXT

Series

Accession:: GSE22079

ID:: 200022079

SRA Run Selector

Select item 1000104762.

Illumina Genome Analyzer II (Acer pseudoplatanus; Aesculus hippocastanum; Betula pendula; Fagus sylvatica; Fraxinus excelsior; Quercus robur; Tilia platyphyllos)

Organism:: Betula pendula; Acer pseudoplatanus; Fagus sylvatica; Fraxinus excelsior; Quercus robur; Aesculus hippocastanum; Tilia platyphyllos

1 Series
2 Samples

Platform

Accession:: GPL10476

ID:: 100010476

Select item 3005489323.

Organism:: Acer pseudoplatanus; Aesculus hippocastanum; Fraxinus excelsior; Quercus robur; Fagus sylvatica; Betula pendula; Tilia platyphyllos

Source name:: pooled leaves from various tree species

Platform:: GPL10476
Series:: GSE22079

Download data: TXT

Sample

Accession:: GSM548932

ID:: 300548932

SRA Run Selector

Format

Summary
Summary (text)
Unique Identifier List

Sort by

Default order
Number of Samples (High to Low)
Number of Samples (Low to High)

Send to:

Choose Destination

File
Clipboard
Collections

Supplemental Content

Filters: Manage Filters

Find related data

Search details

Important Links

Recent activity

Clear Turn Off Turn On

GSM548932[Accession] (3)
GEO DataSets

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

You are here: NCBI > Genes & Expression > Gene Expression Omnibus (GEO) Datasets