GSM634932[Accession] - GEO DataSets

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Items: 4

Select item 2000258561.

Empirical Annotation of the Daphnia pulex genome; Experiment C

(Submitter supplied) Experiments conducted on this tiling array are used to (1) validate the frozen gene sets of the current genome annotation, (2) improve the predicted gene structures by empirically determining UTRs and intron-exon boundaries, identifying missing upstream, internal, and downstream exons and alternative transcripts, (3) propose gene structure models in transcribed regions containing no predicted genes and (4) delineate transcriptionally active regions of the genome from intergenic, intronic and genic regions. more...

Organism:: Daphnia pulex

Type:: Expression profiling by genome tiling array

Platforms:: GPL11200 GPL11201
6 Samples

Download data: PAIR

Series

Accession:: GSE25856

ID:: 200025856

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000258232.

The Ecoresponsive Genome of Daphnia pulex: Empirical annotation of the Daphnia pulex genome

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Daphnia pulex

Type:: Expression profiling by array; Expression profiling by genome tiling array

Platforms:: GPL11278 GPL11201 GPL11200
84 Samples

Download data: PAIR

Series

Accession:: GSE25823

ID:: 200025823

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 1000112003.

NimbleGen Daphnia pulex Whole-genome Tiling Array Set (1 of 2)

(Submitter supplied) This is a Daphnia pulex whole-genome tiling array set (1 of 2) in HD2 1-plex format with 2.1M probes, manufactured by Roche NimbleGen. Daphnia pulex annotated draft genome assembly GenBank accession number: ACJG00000000. Protocol: High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology. See manufacturer's website at http://www.nimblegen.com/.