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Items: 3

1.

Variant and cell-context specific H3K27M reprogramming results in distinct enhancer architecture and oncogenic states

(Submitter supplied) Diffuse intrinsic pontine glioma (DIPG) is a fatal malignancy of the childhood pons characterized by a unique lysine-to-methionine substitution in histone-3 at lysine 27 (H3K27M). We show here that the specific Polycomb targets disrupted by H3K27M and resultant oncogenic state is dependent on both the variant of histone-3 and the cell- context in which the mutation occurs. Through primary DIPG tumor characterization and isogenic expression, we show that the same H3K27M mutation displays distinct modes of oncogenic reprogramming and establishes distinct enhancer architecture depending on whether it occurs in genes encoding H3.3 or H3.1. more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other
Platforms:
GPL18573 GPL11154 GPL20795
155 Samples
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2.

Illumina NextSeq 500 (Homo sapiens)

Platform
Accession:
GPL18573
ID:
100018573
3.

cnmc842t

Organism:
Homo sapiens
Source name:
Primary human patient cnmc842t tumor tissue
Platform:
GPL18573
Series:
GSE126319
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Sample
Accession:
GSM6975364
ID:
306975364
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db=gds|term=GSM6975364[Accession]|query=1|qty=2|blobid=MCID_6681cee49041cd510c1804e7|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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