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Items: 3

1.

Epigenetic and transcriptomic characterization reveals progression markers and essential pathways in clear cell renal cell carcinoma

(Submitter supplied) Identifying tumor-cell-specific markers and elucidating their epigenetic regulation and spatial heterogeneity provides mechanistic insights into cancer etiology. Here, we have performed snRNA-seq and snATAC-seq in 34 and 28 human clear cell renal cell carcinoma (ccRCC) specimens, respectively, with matched bulk proteogenomics data. By identifying 20 tumor-specific markers through a multi-omics tiered approach, we reveal an association between higher ceruloplasmin (CP) expression and reduced survival. more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL24676
62 Samples
Download data: TAR, TSV
Series
Accession:
GSE227898
ID:
200227898

PubMed Full text in PMC Similar studies

2.

Illumina NovaSeq 6000 (Homo sapiens)

Organism:
Homo sapiens
17049 Series
931958 Samples
Download data
Platform
Accession:
GPL24676
ID:
100024676

3.

CPT0001540013_snATAC

Organism:
Homo sapiens
Source name:
Kidney
Platform:
GPL24676
Series:
GSE227898
Download data: TAR, TSV
Sample
Accession:
GSM7110466
ID:
307110466

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db=gds|term=GSM7110466[Accession]|query=3|qty=2|blobid=MCID_6730cca209f698588762d8e0|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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