GSM719401[Accession] - GEO DataSets

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Items: 3

Select item 2000290371.

Allele-specific expression between Arabidopsis genus

(Submitter supplied) We analyzed allele-specific expression (ASE) in leaf and floral tissues of F1 interspecific hybrids generated between the two closely related species of Arabidopsis thaliana and Arabidopsis lyrata with a whole-genome SNP tiling array (AtSNPtile1).

Organism:: Arabidopsis thaliana; Arabidopsis lyrata; Arabidopsis thaliana x Arabidopsis lyrata

Type:: Expression profiling by SNP array; Genome variation profiling by SNP array

Platform:: GPL13483
24 Samples

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Accession:: GSE29037

ID:: 200029037

PubMed Similar studies

Select item 1000134832.

Arabidopsis thaliana AtSNPtile 1

(Submitter supplied) This array contains both SNP probes and tiling probes. SNP probes interrogate ~250K SNPs obtained from resequencing of 20 diverse Arabidopsis thaliana strains (Clark et al. 2007). Each SNP is interrogated by the middle base of four 25mer probes, representing 2 alleles on 2 strands. Tiling probes interrogate ~1.5M unique sequences tiled along the Arabidopsis thaliana genome with ~35 bp resolution. The reference genome for the array design is Columbia-0. more...