GEO DataSets

(Submitter supplied) DNA microarrays are two-dimensional arrangements of specific probes deposited on a substrate that have been widely used in gene expression analysis by measuring mRNA accumulation. The use of this type of microarrays involves the synthesis of cDNA, which has to be double stranded (ds) if the microarray probes are of the positive strand. We have used a custom-synthesized non-commercial NimbleGen microarray from melon to evaluate an alternative method of ds cDNA synthesis, which differs substantially in its economical cost relative to a widely recommended method. more...

Organism:

Cucumis melo

Type:

Expression profiling by array

Platform:

GPL13748

38 Samples

Download data: PAIR

(Submitter supplied) NimbleGen design name 080616_Melogen_60mer_x4. Expression design for 17,444 melon unigenes freely available from Melogen database (http://www.melogen.upv.es/). Four 60-mer probes for every unigen. Microarray 4-plex format (4 x 75K probes). The design includes random GC and other control probes. native array description file: 080616_Melogen_60mer.ndf native array description file: 2006-08-08_Melogen_60mer.ngd Protocol: High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology. more...

Organism:

Cucumis melo

6 Series

179 Samples

Download data: NDF, NGD