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Items: 3

1.

Base-resolution m5C profiling across the mammalian transcriptome by bisulfite-free enzyme-assisted chemical labeling approach

(Submitter supplied) 5-methylcytosine (m5C) is a prevalent RNA modification crucial for gene expression regulation. However, accurate and sensitive m5C sites identification remains challenging due to severe RNA degradation and reduced sequence complexity during bisulfite sequencing (BS-seq). Here, we report m5C-TAC-seq, a bisulfite-free approach combining TET-assisted m5C-to-f5C oxidation with selective chemical labeling, therefore enabling direct base-resolution m5C detection through pre-enrichment and C-to-T transitions at m5C sites. more...
Organism:
Mus musculus; Homo sapiens
Type:
Methylation profiling by high throughput sequencing
Platforms:
GPL29480 GPL28330 GPL24247
104 Samples
Download data: BW, CSV, TXT, XLS
Series
Accession:
GSE242724
ID:
200242724
2.

DNBSEQ-T7 (Mus musculus)

Platform
Accession:
GPL28330
ID:
100028330
3.

mRNA_mESC_WT/D0_Ctrl_Rep1

Organism:
Mus musculus
Source name:
mESC
Platform:
GPL28330
Series:
GSE242724
Download data: TXT
Sample
Accession:
GSM7767711
ID:
307767711
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