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Items: 3

1.

Three-dimensional genome architecture persists in a 52,000-year-old woolly mammoth skin sample

(Submitter supplied) Analyses of ancient DNA typically involve sequencing the surviving short oligonucleotides, and aligning to genome assemblies from related, modern species. Here, we report that skin from a female woolly mammoth (†Mammuthus primigenius) which died 52,000 years ago retained its ancient genome architecture. We use PaleoHi-C to map chromatin contacts and assemble its genome, yielding twenty-eight chromosome-length scaffolds. more...
Organism:
Equus asinus; Mammuthus primigenius; Homo sapiens; Elephas maximus indicus; Bos taurus
Type:
Other; Third-party reanalysis
10 related Platforms
136 Samples
Download data: BED, BEDGRAPH, BEDPE, FASTA, HIC, SW, TXT, XLSX
Series
Accession:
GSE268050
ID:
200268050

2.

Illumina HiSeq 2500 (Elephas maximus indicus)

Organism:
Elephas maximus indicus
1 Series
2 Samples
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Platform
Accession:
GPL34506
ID:
100034506

3.

Hi-C of Elephas maximus DNA Zoo Sample0045, part3

Organism:
Elephas maximus indicus
Source name:
blood: Ear vein
Platform:
GPL34506
Series:
GSE268050
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Sample
Accession:
GSM8285022
ID:
308285022

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