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Items: 3

1.

Three-dimensional genome architecture persists in a 52,000-year-old woolly mammoth skin sample

(Submitter supplied) Analyses of ancient DNA typically involve sequencing the surviving short oligonucleotides, and aligning to genome assemblies from related, modern species. Here, we report that skin from a female woolly mammoth (†Mammuthus primigenius) which died 52,000 years ago retained its ancient genome architecture. We use PaleoHi-C to map chromatin contacts and assemble its genome, yielding twenty-eight chromosome-length scaffolds. more...
Organism:
Homo sapiens; Bos taurus; Elephas maximus indicus; Equus asinus; Mammuthus primigenius
Type:
Other; Third-party reanalysis
10 related Platforms
136 Samples
Download data: BED, BEDGRAPH, BEDPE, FASTA, HIC, SW, TXT, XLSX
Series
Accession:
GSE268050
ID:
200268050

2.

NextSeq 550 (Bos taurus)

Organism:
Bos taurus
9 Series
204 Samples
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Platform
Accession:
GPL27907
ID:
100027907

3.

Hi-C of Bos taurus DNA Zoo Sample6626, Freeze-dried liver, rehydrated in warm water for 1h

Organism:
Bos taurus
Source name:
liver
Platform:
GPL27907
Series:
GSE268050
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Sample
Accession:
GSM8285094
ID:
308285094

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db=gds|term=GSM8285094[Accession]|query=13|qty=6|blobid=MCID_67142556c7d3ca20d56871c3|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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