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Items: 4

1.

A draft map of cis-regulatory sequences in the mouse genome [ChIP-Seq]

(Submitter supplied) As the most widely used mammalian model organism, mice play a critical role in biomedical research for mechanistic study of human development and diseases. Today, functional sequences in the mouse genome are still poorly annotated a decade after its initial sequencing. We report here a map of nearly 300,000 cis-regulatory sequences in the mouse genome, representing active promoters, enhancers and CTCF binding sites in a diverse set of 19 tissues and cell types. more...
Organism:
Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL11002 GPL13112 GPL9250
122 Samples
Download data: BAM, BIGWIG, BOWTIE, TXT
Series
Accession:
GSE29218
ID:
200029218

PubMed Full text in PMC Similar studies SRA Run Selector

2.

A draft map of cis-regulatory sequences in the mouse genome

(Submitter supplied) The laboratory mouse is the most widely used mammalian model organism in biomedical research. The 2.6 billion bases of the mouse genome share a high degree of conservation with the human genome, so a thorough annotation of the mouse genome will be of significant value to understanding the function of the human genome. To date, most of the functional sequences in the mouse genome have yet to be found, and the cis-regulatory sequences in particular are still poorly annotated. more...
Organism:
Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Genome variation profiling by high throughput sequencing
Platforms:
GPL9250 GPL11002 GPL13112
143 Samples
Download data: BAM, BIGWIG, BOWTIE, TXT
Series
Accession:
GSE29184
ID:
200029184

PubMed Full text in PMC Similar studies

3.

Illumina HiSeq 2000 (Mus musculus)

Organism:
Mus musculus
8346 Series
188700 Samples
Download data
Platform
Accession:
GPL13112
ID:
100013112

4.

RenLab-H3K4me3-embryonic-limb

Organism:
Mus musculus
Source name:
Mouse E14.5 limb
Platform:
GPL13112
Series:
GSE29184 GSE29218
Download data: BAM
Sample
Accession:
GSM851294
ID:
300851294

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db=gds|term=GSM851294[Accession]|query=3|qty=2|blobid=MCID_672c9bc436b6895e197a4c55|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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