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Items: 14

1.

Functional genomics of the rapidly replicating bacterium Vibrio natriegens by CRISPRi

(Submitter supplied) RNA-seq analysis to support CRISPRi functional genomics screening.
Organism:
Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
Type:
Expression profiling by high throughput sequencing
Platform:
GPL26194
6 Samples
Download data: XLSX
Series
Accession:
GSE126544
ID:
200126544

PubMed Similar studies SRA Run Selector

2.

Evolutionary Convergence of Pathway-specific Enzyme Expression Stoichiometry

(Submitter supplied) Coexpression of proteins in response to pathway-inducing signals is the founding paradigm of gene regulation. Yet, it remains unexplored whether the relative abundance of coregulated proteins requires precise tuning. Here we present large-scale analyses of protein stoichiometry and corresponding regulatory strategies for 21 pathways and 67-224 operons in divergent bacteria separated by 0.6-2 billion years. more...
Organism:
Bacillus subtilis subsp. subtilis str. 168; Escherichia coli str. K-12 substr. MG1655; Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759; Caulobacter vibrioides
Type:
Other
7 related Platforms
21 Samples
Download data: WIG
Series
Accession:
GSE95211
ID:
200095211

PubMed Full text in PMC Similar studies SRA Run Selector

3.

Illumina NovaSeq 6000 (Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759)

Organism:
Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
Download data
Platform
Accession:
GPL33343
ID:
100033343

4.

Illumina MiSeq (Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759)

Organism:
Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
1 Series
6 Samples
Download data
Platform
Accession:
GPL26194
ID:
100026194

5.

Illumina NextSeq 500 (Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759)

Organism:
Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
1 Series
1 Sample
Download data
Platform
Accession:
GPL24556
ID:
100024556

6.

Illumina HiSeq 2000 (Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759)

Organism:
Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
1 Series
1 Sample
Download data
Platform
Accession:
GPL23093
ID:
100023093

7.

Vn-LB3-37-3

Organism:
Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
Source name:
microbial culture
Platform:
GPL26194
Series:
GSE126544
Download data
Sample
Accession:
GSM3603284
ID:
303603284

SRA Run Selector

8.

Vn-LB3-37-2

Organism:
Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
Source name:
microbial culture
Platform:
GPL26194
Series:
GSE126544
Download data
Sample
Accession:
GSM3603283
ID:
303603283

SRA Run Selector

9.

Vn-LB3-37-1

Organism:
Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
Source name:
microbial culture
Platform:
GPL26194
Series:
GSE126544
Download data
Sample
Accession:
GSM3603282
ID:
303603282

SRA Run Selector

10.

V3-M9

Organism:
Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
Source name:
microbial culture
Platform:
GPL26194
Series:
GSE126544
Download data
Sample
Accession:
GSM3603281
ID:
303603281

SRA Run Selector

11.

V2-M9

Organism:
Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
Source name:
microbial culture
Platform:
GPL26194
Series:
GSE126544
Download data
Sample
Accession:
GSM3603280
ID:
303603280

SRA Run Selector

12.

V1-M9

Organism:
Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
Source name:
microbial culture
Platform:
GPL26194
Series:
GSE126544
Download data
Sample
Accession:
GSM3603279
ID:
303603279

SRA Run Selector

13.

Vibrio_natriegens_Rend_seq_MOPS_comp_3NaCl_25s_frag

Organism:
Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
Source name:
Bacteria
Platform:
GPL24556
Series:
GSE95211
Download data: WIG
Sample
Accession:
GSM2971249
ID:
302971249

SRA Run Selector

14.

Vibrio_natriegens_ribosome_profiling_MOPS_comp_3NaCl

Organism:
Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
Source name:
Bacteria
Platform:
GPL23093
Series:
GSE95211
Download data: WIG
Sample
Accession:
GSM2500126
ID:
302500126

SRA Run Selector

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