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Items: 8

1.

THE IDENTIFICATION OF THE METHYLATION PATTERNS OF TOMATO CURLY STUNT VIRUS IN RESISTANT AND SUSCEPTIBLE TOMATO LINES

(Submitter supplied) Tomato curly stunt virus (ToCSV) is a monopartite begomovirus infecting tomatoes in South Africa, with sequence similarity to tomato yellow leaf curl virus (TYLCV). While there are numerous reports on the mechanism of TYLCV resistance in tomato, the underlying mechanisms in the tomato-ToCSV pathosystem is still relatively unknown. The main aim of this study was to investigate and compare the global methylation profile of ToCSV in two near-isogenic tomato lines, one with a tolerant phenotype (T, NIL396) and one with a susceptible phenotype (S, NIL395). more...
Organism:
Tomato curly stunt virus
Type:
Methylation profiling by high throughput sequencing
Platform:
GPL33059
6 Samples
Download data: PDF, TXT
Series
Accession:
GSE223671
ID:
200223671

PubMed Full text in PMC Similar studies

2.

Illumina NovaSeq 6000 (Tomato curly stunt virus)

Organism:
Tomato curly stunt virus
1 Series
6 Samples
Download data
Platform
Accession:
GPL33059
ID:
100033059

3.

ToCSV isolate from susceptible tomato line, 35 dpi, rep3

Organism:
Tomato curly stunt virus
Source name:
infected leaves
Platform:
GPL33059
Series:
GSE223671
Download data: TXT
Sample
Accession:
GSM6970369
ID:
306970369

SRA Run Selector

4.

ToCSV isolate from susceptible tomato line, 35 dpi, rep2

Organism:
Tomato curly stunt virus
Source name:
infected leaves
Platform:
GPL33059
Series:
GSE223671
Download data: TXT
Sample
Accession:
GSM6970368
ID:
306970368

SRA Run Selector

5.

ToCSV isolate from susceptible tomato line, 35 dpi, rep1

Organism:
Tomato curly stunt virus
Source name:
infected leaves
Platform:
GPL33059
Series:
GSE223671
Download data: TXT
Sample
Accession:
GSM6970367
ID:
306970367

SRA Run Selector

6.

ToCSV isolate from tolerant tomato line, 35 dpi, rep3

Organism:
Tomato curly stunt virus
Source name:
infected leaves
Platform:
GPL33059
Series:
GSE223671
Download data: TXT
Sample
Accession:
GSM6970366
ID:
306970366

SRA Run Selector

7.

ToCSV isolate from tolerant tomato line, 35 dpi, rep2

Organism:
Tomato curly stunt virus
Source name:
infected leaves
Platform:
GPL33059
Series:
GSE223671
Download data: TXT
Sample
Accession:
GSM6970365
ID:
306970365

SRA Run Selector

8.

ToCSV isolate from tolerant tomato line, 35 dpi, rep1

Organism:
Tomato curly stunt virus
Source name:
infected leaves
Platform:
GPL33059
Series:
GSE223671
Download data: TXT
Sample
Accession:
GSM6970364
ID:
306970364

SRA Run Selector

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db=gds|term=txid128941[Organism:noexp]|query=1|qty=2|blobid=MCID_673b709c61a458799d455a5b|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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