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Items: 6

1.

The evolution of CHROMOMETHYLTRANSFERASES and gene body DNA methylation in plants

(Submitter supplied) The evolution of gene body methylation (gbM) and the underlying mechanism is poorly understood. By pairing the largest collection of CHROMOMETHYLTRANSFERASE (CMT) sequences (773) and methylomes (72) across land plants and green algae we provide novel insights into the evolution of gbM and its underlying mechanism. The angiosperm- and eudicot-specific whole genome duplication events gave rise to what are now referred to as CMT1, 2 and 3 lineages. more...
Organism:
Psilotum; Equisetum; Synsepalum dulcificum; Araucaria; Juniperus virginiana; Pereskia grandiflora; Kalanchoe tomentosa; Aristolochia grandiflora; Amentotaxus argotaenia; Hypericum perforatum; Chamaecyparis hodginsii; Dacrydium balansae; Manoao colensoi; Cissus quadrangularis; Impatiens niamniamensis; Gnetum gnemon; Urtica dioica; Cyathea; Aloe vera; Amentotaxus formosana; Cephalotaxus harringtonia; Selaginella kraussiana; Yucca brevifolia; Torreya taxifolia; Microsorum punctatum; Dacrycarpus compactus; Celtis occidentalis; Nepenthes bicalcarata; Lupinus angustifolius; Cyperus papyrus; Diplazium proliferum; Papuacedrus papuana; Encephalartos horridus; Thuja sutchuenensis
Type:
Methylation profiling by high throughput sequencing
34 related Platforms
150 Samples
Download data: TXT
Series
Accession:
GSE81702
ID:
200081702

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina NextSeq 500 (Equisetum)

Organism:
Equisetum
1 Series
4 Samples
Download data
Platform
Accession:
GPL21929
ID:
100021929

3.

Equisetum sp. replicate 4

Organism:
Equisetum
Source name:
genomic DNA
Platform:
GPL21929
Series:
GSE81702
Download data
Sample
Accession:
GSM2171555
ID:
302171555

SRA Run Selector

4.

Equisetum sp. replicate 3

Organism:
Equisetum
Source name:
genomic DNA
Platform:
GPL21929
Series:
GSE81702
Download data
Sample
Accession:
GSM2171554
ID:
302171554

SRA Run Selector

5.

Equisetum sp. replicate 2

Organism:
Equisetum
Source name:
genomic DNA
Platform:
GPL21929
Series:
GSE81702
Download data
Sample
Accession:
GSM2171553
ID:
302171553

SRA Run Selector

6.

Equisetum sp. replicate 1

Organism:
Equisetum
Source name:
genomic DNA
Platform:
GPL21929
Series:
GSE81702
Download data
Sample
Accession:
GSM2171552
ID:
302171552

SRA Run Selector

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db=gds|term=txid3257[Organism:noexp]|query=5|qty=35|blobid=MCID_673842e5d8d15c3625263da6|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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