txid3723[Organism:exp] - GEO DataSets

Select item 2000938791.

De novo Assembly and Comparative Analysis of Ten Petal Transcriptome (Brassicaceae) Revealed Phylogenetic Relationships and Genetic control of Flower Color Variation

(Submitter supplied) Petal is not only the target of selection by horticulturalists to enhance the ornamental value of plants but also emerged as a unique model system for plant organogenesis studies. It is known that three major groups of pigments, betalains, carotenoids and anthocyanins, are responsible for the attractive natural display of flower colors. While carotenoids and betalains generally yield yellow or red colors, anthocyanins confer a diverse range of color from orange to red to violet and blue. more...

Organism:: Brassica oleracea; Matthiola incana; Lobularia maritima; Aubrieta x cultorum; Raphanus sativus; Eruca vesicaria subsp. sativa; Erysimum cheiri; Orychophragmus violaceus; Iberis amara; Malcolmia maritima

Type:: Expression profiling by high throughput sequencing

10 related Platforms
44 Samples

Download data: XLS

Series

Accession:: GSE93879

ID:: 200093879

SRA Run Selector

Select item 2000015322.

NIAS Rice Project

(Submitter supplied) [to be updated] Keywords: other

Organism:: Oryza sativa; Hordeum vulgare; Triticum aestivum; Matthiola incana; Bromus secalinus; Zea mays; Bromus inermis

Type:: Expression profiling by array

Platform:: GPL1245
145 Samples

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Series

Accession:: GSE1532

ID:: 200001532

Analyze with GEO2R

Select item 1000229613.

Illumina HiSeq 2000 (Matthiola incana)

Organism:: Matthiola incana

1 Series
8 Samples

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Platform

Accession:: GPL22961

ID:: 100022961

Select item 3024644284.

Matthiola_incana_W2

Organism:: Matthiola incana

Source name:: Petals

Platform:: GPL22961
Series:: GSE93879

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Sample

Accession:: GSM2464428

ID:: 302464428

SRA Run Selector

Select item 3024644275.

Matthiola_incana_W1

Organism:: Matthiola incana

Source name:: Petals

Platform:: GPL22961
Series:: GSE93879

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Sample

Accession:: GSM2464427

ID:: 302464427

SRA Run Selector

Select item 3024644266.

Matthiola_incana_RB2

Organism:: Matthiola incana

Source name:: Petals

Platform:: GPL22961
Series:: GSE93879

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Sample

Accession:: GSM2464426

ID:: 302464426

SRA Run Selector

Select item 3024644257.

Matthiola_incana_RB1

Organism:: Matthiola incana

Source name:: Petals

Platform:: GPL22961
Series:: GSE93879

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Sample

Accession:: GSM2464425

ID:: 302464425

SRA Run Selector

Select item 3024644248.

Matthiola_incana_LP2

Organism:: Matthiola incana

Source name:: Petals

Platform:: GPL22961
Series:: GSE93879

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Sample

Accession:: GSM2464424

ID:: 302464424

SRA Run Selector

Select item 3024644239.

Matthiola_incana_LP1

Organism:: Matthiola incana

Source name:: Petals

Platform:: GPL22961
Series:: GSE93879

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Sample

Accession:: GSM2464423

ID:: 302464423

SRA Run Selector

Select item 30246442210.

Matthiola_incana_DP2

Organism:: Matthiola incana

Source name:: Petals

Platform:: GPL22961
Series:: GSE93879

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Sample

Accession:: GSM2464422

ID:: 302464422

SRA Run Selector

Select item 30246442111.

Matthiola_incana_DP1

Organism:: Matthiola incana

Source name:: Petals

Platform:: GPL22961
Series:: GSE93879

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Sample

Accession:: GSM2464421

ID:: 302464421

SRA Run Selector

Select item 30002614212.

2210_2_C0003_T0004

Organism:: Matthiola incana

Source name:: Control (CH1) source: Shoot apex of the plants treated without GA for 7 days under low tempearature condition after Uniconazo (channel 1) Target (CH2) source: Shoot apex of the plants treated with GA (10 mg/mL, 2 weeks) under low tempearature condition after Unic (channel 2)

Platform:: GPL1245
Series:: GSE1532

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Sample

Accession:: GSM26142

ID:: 300026142

Select item 30002614113.

2210_2_C0002_T0001

Organism:: Matthiola incana

Source name:: Control: Shoot apex of the plants treated without GA for 3 days under low tempearature condition after Uniconazole treatment (channel 1) Target: Shoot apex of plants treated with GA (10 mg/mL, 1 day) under low tempearature condition after Uniconazole treatment (channel 2)

Platform:: GPL1245
Series:: GSE1532

Download data

Sample

Accession:: GSM26141

ID:: 300026141

Select item 30002614014.

2210_1_C0001_T0001

Organism:: Matthiola incana

Source name:: Control: Shoot apex of the plants treated without GA for 2 weeks under low tempearature condition after Uniconazole treatment (channel 1) Target: Shoot apex of plants treated with GA (10 mg/mL, 2 weeks) under low tempearature condition after Uniconazole treatment (channel 2)

Platform:: GPL1245
Series:: GSE1532

Download data

Sample

Accession:: GSM26140

ID:: 300026140

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Functional Genomics Studies

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