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Items: 9

1.

Genetic determinants of endophytism in the Arabidopsis root mycobiome

(Submitter supplied) Roots of Arabidopsis thaliana do not engage in symbiotic association with mycorrhizal fungi but host taxonomically diverse fungal communities that influence health and disease states. We sequenced the genomes of 41 isolates representative of the A. thaliana root mycobiota for comparative analysis with 79 other plant-associated fungi. We report that root mycobiota members evolved from ancestors having diverse lifestyles and retained diverse repertoires of plant cell wall-degrading enzymes (PCWDEs) and effector-like small secreted proteins. more...
Organism:
Macrophomina phaseolina; Phaeosphaeria sp.; Arabidopsis thaliana; Halenospora varia; Chaetomium sp.; Truncatella angustata; Chaetomium sp. MPI-CAGE-AT-0009; Phaeosphaeria sp. MPI-PUGE-AT-0046c; Paraphoma chrysanthemicola
Type:
Expression profiling by high throughput sequencing
13 related Platforms
39 Samples
Download data: CSV
Series
Accession:
GSE169629
ID:
200169629

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina HiSeq 3000 (Arabidopsis thaliana; Paraphoma chrysanthemicola)

Organism:
Arabidopsis thaliana; Paraphoma chrysanthemicola
1 Series
3 Samples
Download data
Platform
Accession:
GPL29925
ID:
100029925

3.

Illumina HiSeq 3000 (Paraphoma chrysanthemicola)

Organism:
Paraphoma chrysanthemicola
1 Series
3 Samples
Download data
Platform
Accession:
GPL29924
ID:
100029924

4.

At-Pc_3_4426.R

Organism:
Paraphoma chrysanthemicola; Arabidopsis thaliana
Source name:
roots,mycelium
Platform:
GPL29925
Series:
GSE169629
Download data
Sample
Accession:
GSM5211251
ID:
305211251

SRA Run Selector

5.

At-Pc_2_4426.J

Organism:
Arabidopsis thaliana; Paraphoma chrysanthemicola
Source name:
roots,mycelium
Platform:
GPL29925
Series:
GSE169629
Download data
Sample
Accession:
GSM5211250
ID:
305211250

SRA Run Selector

6.

At-Pc_1_4426.B

Organism:
Arabidopsis thaliana; Paraphoma chrysanthemicola
Source name:
roots,mycelium
Platform:
GPL29925
Series:
GSE169629
Download data
Sample
Accession:
GSM5211249
ID:
305211249

SRA Run Selector

7.

Pc_3_4606.F

Organism:
Paraphoma chrysanthemicola
Source name:
mycelium
Platform:
GPL29924
Series:
GSE169629
Download data
Sample
Accession:
GSM5211248
ID:
305211248

SRA Run Selector

8.

Pc_2_4606.E

Organism:
Paraphoma chrysanthemicola
Source name:
mycelium
Platform:
GPL29924
Series:
GSE169629
Download data
Sample
Accession:
GSM5211247
ID:
305211247

SRA Run Selector

9.

Pc_1_4606.D

Organism:
Paraphoma chrysanthemicola
Source name:
mycelium
Platform:
GPL29924
Series:
GSE169629
Download data
Sample
Accession:
GSM5211246
ID:
305211246

SRA Run Selector

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db=gds|term=txid798071[Organism:noexp]|query=11|qty=10|blobid=MCID_67397886c6023e543c2c506f|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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