GEO DataSets

(Submitter supplied) Decomposition of soil organic matter in forest soils is thought to be controlled by the activity of saprotrophic fungi, while biotrophic fungi including ectomycorrhizal fungi act as vectors for input of plant carbon. The limited decomposing ability of ectomycorrhizal fungi is supported by recent findings showing that they have lost many of the genes that encode hydrolytic plant cell-wall degrading enzymes in their saprophytic ancestors. more...

Organism:

Paxillus involutus; Laccaria bicolor; Coniophora puteana; Suillus luteus; Serpula lacrymans; Jaapia argillacea; Hebeloma cylindrosporum; Piloderma croceum; Hydnomerulius pinastri

Type:

Expression profiling by high throughput sequencing

9 related Platforms

54 Samples

Download data: TAB

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:

Piloderma croceum; Serendipita vermifera; Suillus luteus; Amanita muscaria; Hebeloma cylindrosporum; Oidiodendron maius; Tulasnella calospora; Paxillus involutus

Type:

Expression profiling by high throughput sequencing

10 related Platforms

42 Samples

Download data: TXT

(Submitter supplied) Illumina HiSeq technology was used to generate mRNA profiles from Piloderma croceum ectomycorrhizal roots compared to free-living mycelium . Mycorrhizal roots were harvested after 8 weeks, pooled and used for RNA extraction. Reads of 2X100bp were generated and aligned to Piloderma croceum (http://genome.jgi-psf.org/Pilcr1/Pilcr1.home.html) using CLC Genomics Workbench 6.

Organism:

Piloderma croceum

Type:

Expression profiling by high throughput sequencing

Platform:

GPL19512

6 Samples

Download data: TXT